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Description
The existing output for predicted links looks like this:
source_node destination_node score
ENSP00000451575 ENSP00000435370 0.9370759965425138
ENSP00000451575 ENSP00000435370 0.9370759965425138
ENSP00000451575 ENSP00000361636 0.9361207132288921
ENSP00000451575 ENSP00000361636 0.9361207132288921
ENSP00000451575 ENSP00000357879 0.9361171909487621
The corresponding columns in SSSOM are subject_id
, object_id
, and confidence
.
We can change the column heading and already be compliant.
It would be best to include some provenance as well, though - a string can go in additional columns, mapping_tool
and mapping_tool_version
.
We have a few different things to keep track of here:
- neat-ml version
- grape version
- contents of specific neat config
So this may not capture the entirety of the mapping, but it can be a frame of reference.
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