From 7aecb90892b58ff2ea76aa2120e5a2b11ff0092b Mon Sep 17 00:00:00 2001 From: Nick Vandewiele Date: Thu, 7 Jun 2012 10:26:47 -0400 Subject: [PATCH] number of plog rates written to pdepnetworks set to fame default For now, the phrase "Could be different for seed and library reactions, but default for FAME-generated rates is probably " that was written to pdepnetworks.txt in the restart folder is replaced by the FAME default number of PLOGS. WARNING: this is a temporary solution that (almost) certainly works in absence of seed mechanisms and PKLs, PRLs but certainly fails in presence of the latter. Check Github issue threads for more information. Tested successfully on the 1,3-Hexadiene example. --- source/RMG/jing/rxnSys/ReactionModelGenerator.java | 3 ++- 1 file changed, 2 insertions(+), 1 deletion(-) diff --git a/source/RMG/jing/rxnSys/ReactionModelGenerator.java b/source/RMG/jing/rxnSys/ReactionModelGenerator.java index 8b2e504d..ead9f3cb 100644 --- a/source/RMG/jing/rxnSys/ReactionModelGenerator.java +++ b/source/RMG/jing/rxnSys/ReactionModelGenerator.java @@ -2778,7 +2778,8 @@ private void writePDepNetworks() { bw.newLine(); bw.write("NumberOfChebyPress: " + numChebyPress); bw.newLine(); - bw.write("NumberOfPLogs: Could be different for seed and library reactions, but default for FAME-generated rates is probably "+ numPlog); + //Could be different for seed and library reactions, but default for FAME-generated rates is probably + bw.write("NumberOfPLogs: "+ numPlog); bw.newLine(); bw.newLine();