diff --git a/.github/workflows/bootstrap.yml b/.github/workflows/bootstrap.yml
index 264e0896..df6e6eb5 100644
--- a/.github/workflows/bootstrap.yml
+++ b/.github/workflows/bootstrap.yml
@@ -58,7 +58,7 @@ jobs:
                 token: ${{ secrets.CI_FLOW }}
 
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: '3.11'
 
diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
index f409baa3..a96d4584 100644
--- a/.github/workflows/docs.yml
+++ b/.github/workflows/docs.yml
@@ -11,7 +11,7 @@ jobs:
         steps:
         -   uses: actions/checkout@v4
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: '3.10'
         -   name: Install neurodocker
diff --git a/.github/workflows/publish.yml b/.github/workflows/publish.yml
index fbc3063c..272ff2e6 100644
--- a/.github/workflows/publish.yml
+++ b/.github/workflows/publish.yml
@@ -12,7 +12,7 @@ jobs:
         -   uses: actions/checkout@v4
 
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: '3.10'
 
diff --git a/.github/workflows/pull-request.yml b/.github/workflows/pull-request.yml
index a764f1b7..b37b0546 100644
--- a/.github/workflows/pull-request.yml
+++ b/.github/workflows/pull-request.yml
@@ -33,7 +33,7 @@ jobs:
                 echo APPTAINER_CACHEDIR=/dev/shm/$(whoami)/singularity >> $GITHUB_ENV
         -   uses: actions/checkout@v4
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: ${{ matrix.python-version }}
                 allow-prereleases: true
diff --git a/.github/workflows/release.yml b/.github/workflows/release.yml
index 3e5f8326..f1f14fd0 100644
--- a/.github/workflows/release.yml
+++ b/.github/workflows/release.yml
@@ -27,7 +27,7 @@ jobs:
             run: git config --local --unset http.https://github.com/.extraheader
 
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: '3.11'
 
diff --git a/.github/workflows/run_precommit.yml b/.github/workflows/run_precommit.yml
index ac8f85d4..05e1e268 100644
--- a/.github/workflows/run_precommit.yml
+++ b/.github/workflows/run_precommit.yml
@@ -11,5 +11,5 @@ jobs:
         runs-on: ubuntu-latest
         steps:
         -   uses: actions/checkout@v4
-        -   uses: actions/setup-python@v5
+        -   uses: actions/setup-python@v6
         -   uses: pre-commit/action@v3.0.1
diff --git a/.github/workflows/test_doc.yml b/.github/workflows/test_doc.yml
index 6ce8ceca..2f9c79d8 100644
--- a/.github/workflows/test_doc.yml
+++ b/.github/workflows/test_doc.yml
@@ -25,7 +25,7 @@ jobs:
         -   uses: actions/checkout@v4
 
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: '3.11'
 
diff --git a/.github/workflows/type_checks.yml b/.github/workflows/type_checks.yml
index dd9feeb2..5cd964c9 100644
--- a/.github/workflows/type_checks.yml
+++ b/.github/workflows/type_checks.yml
@@ -25,7 +25,7 @@ jobs:
         -   uses: actions/checkout@v4
 
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: ${{ matrix.python-version }}
                 allow-prereleases: true
diff --git a/.github/workflows/update_precommit_hooks.yml b/.github/workflows/update_precommit_hooks.yml
index 64644861..d7bde67f 100644
--- a/.github/workflows/update_precommit_hooks.yml
+++ b/.github/workflows/update_precommit_hooks.yml
@@ -34,7 +34,7 @@ jobs:
         -   name: Checkout repo
             uses: actions/checkout@v4
         -   name: Set up Python
-            uses: actions/setup-python@v5
+            uses: actions/setup-python@v6
             with:
                 python-version: '3.12'
                 allow-prereleases: false