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- Zanni et al (2015) identified several new Drosophila TEs by mining sequences in the flamenco locus: https://www.pnas.org/content/110/49/19842
- Table S2 summarizes the new TE sequences. There are 9 D. melanogaster sequences listed in Table S2
- New TE sequences are present in Dataset S2: https://www.pnas.org/highwire/filestream/614491/field_highwire_adjunct_files/2/sd02.docx
- added copy of sd02.docx to pers comm directory: https://github.com/bergmanlab/transposons/blob/master/misc/personal_communications/zanni/sd02.docx
- converted sd02.docx to txt format: https://github.com/bergmanlab/transposons/blob/master/misc/personal_communications/zanni/sd02.txt
- There are 7 new D. melanogaster sequences in the sd02 file
$ grep melanogaster *txt
>G6-fl [Drosophila melanogaster]
>Gedeo_Dm [Drosophila melanogaster]
>Gypsy2S [Drosophila melanogaster]
>GYPSY6S_A [Drosophila melanogaster]
>GYPSY6S_B [Drosophila melanogaster]
>Phidippo_Dm [Drosophila melanogaster] rebuilt without Pifo insertion
>Pifo_Dm_A [Drosophila melanogaster]
- Pifo Dm B and C are in Table S2 but not in file sd02
- G6-fl is RIJ (jockey LINE-element), others are RLG (gypsy LTR element), according to Wicker 2007 Figure 1.
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