diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..274d44e --- /dev/null +++ b/.gitignore @@ -0,0 +1,2 @@ +.ipynb_checkpoints +jdunca51.ipynb diff --git a/README.md b/README.md index 66ba4d9..0d96cfd 100644 --- a/README.md +++ b/README.md @@ -12,6 +12,9 @@ where XX is between 0 and 33: to find your number look at the list below. ### Goal: 1. Download and store data from npm on all your packages on mongodb database: fdac18mp2, collection: npm_yourutkid, the example code is in readNpm.py +``` +zcat /data/NPMvulnerabilities/NPMpkglist/NPMpkglist_XX.gz | python3 readNpm.py +``` 1. Identify the packages that have GH repos (based on the stored info) ``` import pymongo, json, sys @@ -25,23 +28,57 @@ for r in coll.find(): if 'metadata' in r: r = r['metadata'] if 'repository' in r: - r = r['url'] - getReleases('url') + r = r['repository'] + if 'url' in r: + r = r['url'] + print (r) +``` +Suppose the above code is in extrNpm.py. To output the urls: +``` +python3 extrNpm.py > myurls ``` -2. For each such package, get a list of all releases. Example file is readGit.py (you can use it with the snippet above to get releases). Reference to Github API: + +2. For each such package, get a list of all releases. Example file is readGit.py (you can use it with the snippet above to get releases). It reads from standard input and populates +releases_yourutkid collection. Reference to Github API: ``` https://developer.github.com/v3/repos/releases/ ``` -3. Find no. of commits between the latest and other releases. +3. Extract releases from mongodb +``` +import pymongo, json, sys +client = pymongo.MongoClient (host="da1") +db = client ['fdac18mp2'] +id = "audris" +coll = db [ 'releases_' + id] +for r in coll.find(): + n = r['name'] + if 'values' in r: + for v in r['values']: + if 'tag_name' in v: + print (n+';'+v['tag_name']) +``` +Suppose the above code is in extrRels.py. To output the urls: +``` +cat myurls | python3 extrRels.py > myrels +``` + + +4. Find no. of commits between the latest and other releases. For example: E.g. https://api.github.com/repos/webpack-contrib/html-loader/compare/v0.5.4...master or https://api.github.com/repos/git/git/compare/v2.2.0-rc1...v2.2.0-rc2 More resource: https://stackoverflow.com/questions/26925312/github-api-how-to-compare-2-commits (look for comparing the tags in the answer) Get the data from the json, look for something like to get no. of commits between releases +``` "status": "ahead", "ahead_by": 24, "behind_by": 0, "total_commits": 24, +``` +For example +``` +cat myrels | python3 compareRels.py +``` | number | GitHub Username | NetID | Name | |:-:|:-:|:-:|---| diff --git a/compareRels_rdabbs1.py b/compareRels_rdabbs1.py new file mode 100644 index 0000000..30c82e6 --- /dev/null +++ b/compareRels_rdabbs1.py @@ -0,0 +1,82 @@ +import sys, re, pymongo, json, time +import datetime +from requests.auth import HTTPBasicAuth +import requests +gleft = 1500 + +#client = pymongo.MongoClient () +client = pymongo.MongoClient (host="da1.eecs.utk.edu") +login = sys.argv[1] +passwd = sys.argv[2] + +baseurl = 'https://api.github.com/repos' +headers = {'Accept': 'application/vnd.github.v3.star+json'} +headers = {'Accept': 'application/vnd.github.hellcat-preview+json'} + +db = client['fdac18mp2'] # added in class +collName = 'releases_rdabbs1' +coll = db [collName] +def wait (left): + while (left < 20): + l = requests .get('https://api.github.com/rate_limit', auth=(login,passwd)) + if (l.ok): + left = int (l.headers.get ('X-RateLimit-Remaining')) + reset = int (l.headers.get ('x-ratelimit-reset')) + now = int (time.time ()) + dif = reset - now + if (dif > 0 and left < 20): + sys.stderr.write ("waiting for " + str (dif) + "s until"+str(left)+"s\n") + time .sleep (dif) + time .sleep (0.5) + return left + +def get (url): + global gleft + gleft = wait (gleft) + values = [] + # sys.stderr.write ("left:"+ str(left)+"s\n") + try: + r = requests .get (url, headers=headers, auth=(login, passwd)) + time .sleep (0.5) + if (r.ok): + gleft = int(r.headers.get ('X-RateLimit-Remaining')) + lll = r.headers.get ('Link') + links = [''] + if lll is not None: + links = lll.split(',') + except Exception as e: + sys.stderr.write ("Could not get:" + url + ". Exception:" + str(e) + "\n") + return (json.loads(r.text)) + +def chunks(l, n): + if n < 1: n = 1 + return [l[i:i + n] for i in range(0, len(l), n)] + +def cmp_rel (url): + v = [] + size = 0 + try: + v = get (url) + except Exception as e: + sys.stderr.write ("Could not get:" + url + ". Exception:" + str(e) + "\n") + if 'ahead_by' in v and 'behind_by' in v: + print (url+';'+str(v['ahead_by'])+';'+str(v['behind_by'])) + else: + sys.stderr.write ("Could not compare releases for: " + url + "; There exists no common ancestor between the two versions." + "\n") + + +p2r = {} +for l in sys.stdin.readlines(): + l = l.rstrip() + p, r = l.split(';') + if p in p2r: + p2r[p] .append (r) + else: + p2r[p] = [r] + +for p in p2r: + rs = p2r[p] + if len (rs) > 1: + for i in range(1,len (rs)): + url = 'https://api.github.com/repos/'+p+'/compare/' + rs[i-1] + '...' + rs[i] + cmp_rel (url) diff --git a/extrNpm_rdabbs1.py b/extrNpm_rdabbs1.py new file mode 100644 index 0000000..4ef68a1 --- /dev/null +++ b/extrNpm_rdabbs1.py @@ -0,0 +1,15 @@ +import pymongo, json, sys +client = pymongo.MongoClient (host="da1") +db = client ['fdac18mp2'] +id = "rdabbs1" +coll = db [ 'npm_' + id] +for r in coll.find(): + if 'collected' in r: + r = r['collected'] + if 'metadata' in r: + r = r['metadata'] + if 'repository' in r: + r = r['repository'] + if 'url' in r: + r = r['url'] + print (r) diff --git a/extrRels_rdabbs1.py b/extrRels_rdabbs1.py new file mode 100644 index 0000000..c0d6331 --- /dev/null +++ b/extrRels_rdabbs1.py @@ -0,0 +1,11 @@ +import pymongo, json, sys +client = pymongo.MongoClient (host="da1") +db = client ['fdac18mp2'] +id = "rdabbs1" +coll = db [ 'releases_' + id] +for r in coll.find(): + n = r['name'] + if 'values' in r: + for v in r['values']: + if 'tag_name' in v: + print (n+';'+v['tag_name']) diff --git a/myrels_rdabbs1 b/myrels_rdabbs1 new file mode 100644 index 0000000..1ecf52f --- /dev/null +++ b/myrels_rdabbs1 @@ -0,0 +1,24058 @@ +js-accounts/accounts;v0.3.0-beta.30 +js-accounts/accounts;v0.3.0-beta.27 +js-accounts/accounts;v0.3.0-beta.29 +js-accounts/accounts;v0.3.0-beta.28 +js-accounts/accounts;v0.3.0-beta.25 +js-accounts/accounts;v0.3.0-beta.26 +js-accounts/accounts;v0.3.0-beta.24 +js-accounts/accounts;v0.3.0-beta.23 +js-accounts/accounts;v0.3.0-beta.22 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Visual, drag and drop tools allow anyone to create web apps with minimal learning curve. 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Production/Stable', 'fullpath': 'Development Status :: 5 - Production/Stable', 'shortname': 'production', 'id': 11}], 'license': [{'fullname': 'GNU General Public License version 2.0 (GPLv2)', 'fullpath': 'License :: OSI-Approved Open Source :: GNU General Public License version 2.0 (GPLv2)', 'shortname': 'gpl', 'id': 15}], 'database': [], 'topic': [{'fullname': 'System', 'fullpath': 'Topic :: System', 'shortname': 'system', 'id': 136}], 'environment': [{'fullname': 'Curses/Ncurses', 'fullpath': 'User Interface :: Toolkits/Libraries :: Curses/Ncurses', 'shortname': 'curses', 'id': 227}], 'translation': [], 'language': [{'fullname': 'C', 'fullpath': 'Programming Language :: C', 'shortname': 'c', 'id': 164}]}, 'url': 'https://sourceforge.net/p/whowatch/'}\n", + "{'socialnetworks': [{'socialnetwork': 'Twitter', 'accounturl': ''}, {'socialnetwork': 'Facebook', 'accounturl': None}], 'summary': 'WidgetArea is a small simple application that enables you to use image', 'preferred_support_tool': '', 'screenshots': [{'url': 'https://sourceforge.net/p/widgetarea/screenshot/win.png', 'thumbnail_url': 'https://sourceforge.net/p/widgetarea/screenshot/win.png/thumb', 'caption': 'WidgetArea running on Windows'}, {'url': 'https://sourceforge.net/p/widgetarea/screenshot/lin.png', 'thumbnail_url': 'https://sourceforge.net/p/widgetarea/screenshot/lin.png/thumb', 'caption': 'WidgetArea running on Linux'}, {'url': 'https://sourceforge.net/p/widgetarea/screenshot/Screen%20Shot%202018-03-04%20at%201.54.40%20AM.png', 'thumbnail_url': 'https://sourceforge.net/p/widgetarea/screenshot/Screen%20Shot%202018-03-04%20at%201.54.40%20AM.png/thumb', 'caption': 'WidgetArea running on Mac OS X'}], 'tools': [{'mount_point': 'reviews', 'name': 'reviews', 'tool_label': 'Reviews', 'url': '/p/widgetarea/reviews/', 'mount_label': 'Reviews', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'files', 'name': 'files', 'tool_label': 'Files', 'url': '/p/widgetarea/files/', 'mount_label': 'Files', 'icons': {'32': 'images/downloads_32.png', '48': 'images/downloads_48.png', '24': 'images/downloads_24.png'}, 'installable': False}, {'mount_point': 'summary', 'sourceforge_group_id': 1965873, 'name': 'summary', 'tool_label': 'Summary', 'url': '/p/widgetarea/summary/', 'mount_label': 'Summary', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'support', 'name': 'support', 'tool_label': 'Support', 'url': '/p/widgetarea/support/', 'mount_label': 'Support', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'activity', 'name': 'activity', 'tool_label': 'Tool', 'url': '/p/widgetarea/activity/', 'mount_label': 'Activity', 'icons': {'32': 'images/admin_32.png', '48': 'images/admin_48.png', '24': 'images/admin_24.png'}, 'installable': False}], 'video_url': None, 'shortname': 'widgetarea', 'icon_url': 'https://sourceforge.net/p/widgetarea/icon', 'name': 'WidgetArea', 'private': False, 'creation_date': '2013-09-28', 'moved_to_url': '', 'developers': [{'username': 'mikethedj4', 'url': 'https://sourceforge.net/u/mikethedj4/', 'name': 'MICHΔΣL'}], 'labels': [], '_id': '5246e246b9363c1014bd8379', 'short_description': 'WidgetArea is a small simple application that enables you to use images on your hard drive and display them as widgets on your desktop.\\r\\n\\r\\nNOTE: WidgetArea doesn\\'t fully support GIF animations.\\r\\n\\r\\nMac Usage Instructions: Click the upload image or drag and drop an image there to display in a new window.\\r\\nTo close the newly opened image press \"CMD+W\".\\r\\nTo quit WidgetArea press \"CMD+Q\"\\r\\nTo move the image just drag it anywhere on the screen.\\r\\nYes, you can resize added images in this release.\\r\\nThere\\'s no built-in option to adjust pinning or transparency in this release. However, WidgetArea for Mac does support transparent PNG\\'s and GIF images.', 'forge': 'sourceforge', 'status': 'abandoned', 'external_homepage': 'http://widgetarea.sourceforge.net/', 'preferred_support_url': '', 'categories': {'os': [{'fullname': 'Win2K', 'fullpath': 'Operating System :: Modern (Vendor-Supported) Desktop Operating Systems :: Win2K', 'shortname': 'mswin_2000', 'id': 420}, {'fullname': 'Linux', 'fullpath': 'Operating System :: Modern (Vendor-Supported) Desktop Operating Systems :: Linux', 'shortname': 'linux', 'id': 201}, {'fullname': 'WinXP', 'fullpath': 'Operating System :: Modern (Vendor-Supported) Desktop Operating Systems :: WinXP', 'shortname': 'mswin_xp', 'id': 419}, {'fullname': 'Vista', 'fullpath': 'Operating System :: Modern (Vendor-Supported) Desktop Operating Systems :: Vista', 'shortname': 'vista', 'id': 657}, {'fullname': 'Windows 7', 'fullpath': 'Operating System :: Modern (Vendor-Supported) Desktop Operating Systems :: Windows 7', 'shortname': 'win7', 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'tool_label': 'Mailing Lists', 'url': '/p/wifipedia-w/mailman/', 'mount_label': 'Mailing Lists', 'icons': {'32': 'images/forums_32.png', '48': 'images/forums_48.png', '24': 'images/forums_24.png'}, 'installable': False}, {'mount_point': 'summary', 'sourceforge_group_id': 2833950, 'name': 'summary', 'tool_label': 'Summary', 'url': '/p/wifipedia-w/summary/', 'mount_label': 'Summary', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'code', 'name': 'svn', 'tool_label': 'SVN', 'url': '/p/wifipedia-w/code/', 'mount_label': 'Code', 'icons': {'32': 'images/code_32.png', '48': 'images/code_48.png', '24': 'images/code_24.png'}, 'installable': False}, {'mount_point': 'files', 'name': 'files', 'tool_label': 'Files', 'url': '/p/wifipedia-w/files/', 'mount_label': 'Files', 'icons': {'32': 'images/downloads_32.png', '48': 'images/downloads_48.png', '24': 'images/downloads_24.png'}, 'installable': False}, {'mount_point': 'reviews', 'name': 'reviews', 'tool_label': 'Reviews', 'url': '/p/wifipedia-w/reviews/', 'mount_label': 'Reviews', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'support', 'name': 'support', 'tool_label': 'Support', 'url': '/p/wifipedia-w/support/', 'mount_label': 'Support', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'activity', 'name': 'activity', 'tool_label': 'Tool', 'url': '/p/wifipedia-w/activity/', 'mount_label': 'Activity', 'icons': {'32': 'images/admin_32.png', '48': 'images/admin_48.png', '24': 'images/admin_24.png'}, 'installable': False}], 'video_url': '', 'shortname': 'wifipedia-w', 'icon_url': None, 'name': 'Wifipedia?w', 'private': False, 'creation_date': '2017-03-30', 'moved_to_url': '', 'developers': [{'username': 'sigridd5westby', 'url': 'https://sourceforge.net/u/sigridd5westby/', 'name': 'sigridd5westby'}], 'labels': [], '_id': '58dd698bbcf63a12335d632f', 'short_description': '', 'forge': 'sourceforge', 'status': 'active', 'external_homepage': 'https://wifipedia-w.sourceforge.io', 'preferred_support_url': '', 'categories': {'os': [], 'audience': [], 'developmentstatus': [], 'license': [], 'database': [], 'topic': [], 'environment': [], 'translation': [], 'language': []}, 'url': 'https://sourceforge.net/p/wifipedia-w/'}\n", + "{'socialnetworks': [], 'summary': '', 'preferred_support_tool': '', 'screenshots': [], 'tools': [{'mount_point': 'support', 'name': 'support', 'tool_label': 'Support', 'url': '/p/w-o-a/support/', 'mount_label': 'Support', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'wiki', 'name': 'wiki', 'tool_label': 'Wiki', 'url': '/p/w-o-a/wiki/', 'mount_label': 'Wiki', 'icons': {'32': 'images/wiki_32.png', '48': 'images/wiki_48.png', '24': 'images/wiki_24.png'}, 'installable': True}, {'mount_point': 'files', 'name': 'files', 'tool_label': 'Files', 'url': '/p/w-o-a/files/', 'mount_label': 'Files', 'icons': {'32': 'images/downloads_32.png', '48': 'images/downloads_48.png', '24': 'images/downloads_24.png'}, 'installable': False}, {'mount_point': 'summary', 'sourceforge_group_id': 302930, 'name': 'summary', 'tool_label': 'Summary', 'url': '/p/w-o-a/summary/', 'mount_label': 'Summary', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'reviews', 'name': 'reviews', 'tool_label': 'Reviews', 'url': '/p/w-o-a/reviews/', 'mount_label': 'Reviews', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'activity', 'name': 'activity', 'tool_label': 'Tool', 'url': '/p/w-o-a/activity/', 'mount_label': 'Activity', 'icons': {'32': 'images/admin_32.png', '48': 'images/admin_48.png', '24': 'images/admin_24.png'}, 'installable': False}], 'video_url': '', 'shortname': 'w-o-a', 'icon_url': None, 'name': 'Wiki Of Agriculture', 'private': False, 'creation_date': '2010-02-04', 'moved_to_url': '', 'developers': [{'username': 'demo', 'url': 'https://sourceforge.net/u/demo/', 'name': 'Tore Halvorsen'}, {'username': 'phanleson', 'url': 'https://sourceforge.net/u/phanleson/', 'name': 'son phan'}], 'labels': [], '_id': '51646bd9e88f3d0a8fc32b15', 'short_description': 'Wiki Of Agriculture System , Building a system', 'forge': 'sourceforge', 'status': 'active', 'external_homepage': 'https://w-o-a.sourceforge.io', 'preferred_support_url': '', 'categories': {'os': [], 'audience': [], 'developmentstatus': [], 'license': [{'fullname': 'BSD License', 'fullpath': 'License :: OSI-Approved Open Source :: BSD License', 'shortname': 'bsd', 'id': 187}], 'database': [], 'topic': [], 'environment': [], 'translation': [], 'language': []}, 'url': 'https://sourceforge.net/p/w-o-a/'}\n", + "{'socialnetworks': [], 'summary': '', 'preferred_support_tool': '', 'screenshots': [], 'tools': [{'mount_point': 'discussion', 'name': 'discussion', 'tool_label': 'Discussion', 'url': '/p/w-i-k-i/discussion/', 'mount_label': 'Discussion', 'icons': {'32': 'images/forums_32.png', '48': 'images/forums_48.png', '24': 'images/forums_24.png'}, 'installable': True}, {'mount_point': 'support-requests', 'name': 'tickets', 'tool_label': 'Tickets', 'url': '/p/w-i-k-i/support-requests/', 'mount_label': 'Support Requests', 'icons': {'32': 'images/tickets_32.png', '48': 'images/tickets_48.png', '24': 'images/tickets_24.png'}, 'installable': True}, {'mount_point': 'patches', 'name': 'tickets', 'tool_label': 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'reviews', 'tool_label': 'Reviews', 'url': '/p/w-i-k-i/reviews/', 'mount_label': 'Reviews', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'files', 'name': 'files', 'tool_label': 'Files', 'url': '/p/w-i-k-i/files/', 'mount_label': 'Files', 'icons': {'32': 'images/downloads_32.png', '48': 'images/downloads_48.png', '24': 'images/downloads_24.png'}, 'installable': False}, {'mount_point': 'summary', 'sourceforge_group_id': 61069, 'name': 'summary', 'tool_label': 'Summary', 'url': '/p/w-i-k-i/summary/', 'mount_label': 'Summary', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'support', 'name': 'support', 'tool_label': 'Support', 'url': '/p/w-i-k-i/support/', 'mount_label': 'Support', 'icons': {'32': 'images/sftheme/32x32/blog_32.png', '48': 'images/sftheme/48x48/blog_48.png', '24': 'images/sftheme/24x24/blog_24.png'}, 'installable': False}, {'mount_point': 'bugs', 'name': 'tickets', 'tool_label': 'Tickets', 'url': '/p/w-i-k-i/bugs/', 'mount_label': 'Bugs', 'icons': {'32': 'images/tickets_32.png', '48': 'images/tickets_48.png', '24': 'images/tickets_24.png'}, 'installable': True}, {'mount_point': 'wiki', 'name': 'wiki', 'tool_label': 'Wiki', 'url': '/p/w-i-k-i/wiki/', 'mount_label': 'Wiki', 'icons': {'32': 'images/wiki_32.png', '48': 'images/wiki_48.png', '24': 'images/wiki_24.png'}, 'installable': True}, {'mount_point': 'code', 'name': 'cvs', 'tool_label': 'CVS', 'url': '/p/w-i-k-i/code/', 'mount_label': 'Code', 'icons': {'32': 'images/code_32.png', '48': 'images/code_48.png', '24': 'images/code_24.png'}, 'installable': False}, {'mount_point': 'activity', 'name': 'activity', 'tool_label': 'Tool', 'url': '/p/w-i-k-i/activity/', 'mount_label': 'Activity', 'icons': {'32': 'images/admin_32.png', '48': 'images/admin_48.png', '24': 'images/admin_24.png'}, 'installable': False}], 'video_url': '', 'shortname': 'w-i-k-i', 'icon_url': None, 'name': 'Wiki!', 'private': False, 'creation_date': '2002-08-27', 'moved_to_url': '', 'developers': [], 'labels': [], '_id': '513a0eca27184634726075a2', 'short_description': 'A very compact flat-file PHP wiki system, supporting full templating, user logins and revision history.', 'forge': 'sourceforge', 'status': 'active', 'external_homepage': 'http://w-i-k-i.sourceforge.net', 'preferred_support_url': '', 'categories': {'os': [{'fullname': 'OS Independent (Written in an interpreted language)', 'fullpath': 'Operating System :: Grouping and Descriptive Categories :: OS Independent (Written in an interpreted language)', 'shortname': 'independent', 'id': 235}], 'audience': [{'fullname': 'Other Audience', 'fullpath': 'Intended Audience :: Other Audience', 'shortname': 'other', 'id': 5}], 'developmentstatus': [{'fullname': '7 - Inactive', 'fullpath': 'Development Status :: 7 - Inactive', 'shortname': 'inactive', 'id': 358}], 'license': [{'fullname': 'GNU General Public License version 2.0 (GPLv2)', 'fullpath': 'License :: OSI-Approved Open Source :: GNU General Public License version 2.0 (GPLv2)', 'shortname': 'gpl', 'id': 15}], 'database': [], 'topic': [{'fullname': 'Dynamic Content', 'fullpath': 'Topic :: Internet :: WWW/HTTP :: Dynamic Content', 'shortname': 'dynamic', 'id': 92}, {'fullname': 'Site Management', 'fullpath': 'Topic :: Internet :: WWW/HTTP :: Site Management', 'shortname': 'sitemanagement', 'id': 243}], 'environment': [{'fullname': 'Web-based', 'fullpath': 'User Interface :: Web-based', 'shortname': 'web', 'id': 237}], 'translation': [{'fullname': 'English', 'fullpath': 'Translations :: English', 'shortname': 'english', 'id': 275}], 'language': [{'fullname': 'PHP', 'fullpath': 'Programming Language :: PHP', 'shortname': 'php', 'id': 183}]}, 'url': 'https://sourceforge.net/p/w-i-k-i/'}\n" + ] + } + ], + "source": [ + "import sys\n", + "import re\n", + "import pymongo\n", + "import json\n", + "import time\n", + "import datetime\n", + "import requests\n", + "from bs4 import BeautifulSoup\n", + "\n", + "dbname = \"fdac18mp2\" #please use this database\n", + "collname = \"glprj_rdabbs1\" #please modify so you store data in your collection\n", + "my_char = 'w'\n", + "\n", + "# beginning page index\n", + "begin = \"1\"\n", + "client = pymongo.MongoClient()\n", + "\n", + "db = client[dbname]\n", + "coll = db[collname]\n", + "\n", + "\n", + "gitlab_url = \"https://gitlab.com/api/v4/projects?archived=false&membership=false&order_by=created_at&owned=false&page=\" + begin + \\\n", + " \"&per_page=99&simple=false&sort=desc&starred=false&statistics=false&with_custom_attributes=false&with_issues_enabled=false&with_merge_requests_enabled=false\"\n", + "\n", + "gleft = 20\n", + "\n", + "source_url = \"https://sourceforge.net/directory/?q=\" + my_char + \"&sort=name&page=\"\n", + "rest_url = \"https://sourceforge.net/rest/p/\"\n", + "\n", + "header = {'per_page': 99}\n", + "\n", + "# check remaining query chances for rate-limit restriction\n", + "def wait(left):\n", + " global header\n", + " while (left < 20):\n", + " l = requests.get('https://gitlab.com/api/v4/projects', headers=header)\n", + " if (l.ok):\n", + " left = int(l.headers.get('RateLimit-Remaining'))\n", + " time .sleep(60)\n", + " return left\n", + "\n", + "def project_exists(url):\n", + " r = requests.get(url)\n", + " if r.status_code == 200:\n", + " return True\n", + " return False\n", + "\n", + "def get_source(url, coll, rest):\n", + " page = 1\n", + " project_count = 0\n", + " while True:\n", + " resp = requests.get(url + str(page))\n", + " text = resp.text\n", + " soup = BeautifulSoup(text, 'html.parser')\n", + " if re.search('No results found.', soup.get_text()):\n", + " return\n", + "\n", + " for link in soup.find_all(class_=\"project-icon\", href=True):\n", + " name = re.findall('/projects/([A-Za-z0-9\\-]*)', link.get('href'))\n", + " name = name[0] if name else None\n", + " if name is not None and name.lower().startswith(my_char):\n", + " resp = requests.get(rest + name)\n", + " if resp.status_code == 200:\n", + " info = json.loads(resp.text)\n", + " info['forge'] = 'sourceforge'\n", + " coll.insert_one(info)\n", + " project_count += 1\n", + " if project_count >= 50:\n", + " return\n", + " page += 1\n", + " return\n", + "\n", + "# send queries and extract urls \n", + "def get_gitlab(url, coll):\n", + "\n", + " global gleft\n", + " global header\n", + " global bginnum\n", + " gleft = wait(gleft)\n", + " values = []\n", + " size = 0\n", + " project_count = 0\n", + "\n", + " try:\n", + " r = requests .get(url, headers=header)\n", + " time .sleep(0.5)\n", + " # got blocked\n", + " if r.status_code == 403:\n", + " return \"got blocked\", str(bginnum)\n", + " if (r.ok):\n", + "\n", + " gleft = int(r.headers.get('RateLimit-Remaining'))\n", + " lll = r.headers.get('Link')\n", + " t = r.text\n", + " array = json.loads(t)\n", + " \n", + " for el in array:\n", + " if el['name'].lower().startswith(my_char):\n", + " if project_exists(el['http_url_to_repo']):\n", + " project_count += 1\n", + " el['forge'] = 'gitlab'\n", + " coll.insert_one(el)\n", + " if project_count >= 50:\n", + " return\n", + " \n", + " #next page\n", + " while ('; rel=\"next\"' in lll):\n", + " gleft = int(r.headers.get('RateLimit-Remaining'))\n", + " gleft = wait(gleft)\n", + " # extract next page url\n", + " ll = lll.replace(';', ',').split(',')\n", + " url = ll[ll.index(' rel=\"next\"') -\n", + " 1].replace('<', '').replace('>', '').lstrip()\n", + " \n", + " try:\n", + " r = requests .get(url, headers=header)\n", + " if r.status_code == 403:\n", + " return \"got blocked\", str(bginnum)\n", + " if (r.ok):\n", + " lll = r.headers.get('Link')\n", + " t = r.text\n", + " array1 = json.loads(t)\n", + " for el in array1:\n", + " if el['name'].lower().startswith(my_char):\n", + " if project_exists(el['http_url_to_repo']):\n", + " project_count += 1\n", + " el['forge'] = 'gitlab'\n", + " coll.insert_one(el)\n", + " if project_count >= 50:\n", + " return\n", + " else:\n", + " sys.stderr.write(\"url can not found:\\n\" + url + '\\n')\n", + " return \n", + " except requests.exceptions.ConnectionError:\n", + " sys.stderr.write('could not get ' + url + '\\n')\n", + " \n", + " else:\n", + " sys.stderr.write(\"url can not found:\\n\" + url + '\\n')\n", + " return\n", + "\n", + " except requests.exceptions.ConnectionError:\n", + " sys.stderr.write('could not get ' + url + '\\n')\n", + " except Exception as e:\n", + " sys.stderr.write(url + ';' + str(e) + '\\n')\n", + " \n", + "#start retrieving \n", + "get_gitlab(gitlab_url,coll)\n", + "get_source(source_url, coll, rest_url)\n", + "#print collected data\n", + "for doc in coll.find({}):\n", + " print(doc)" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [] + } + ], + "metadata": { + "kernelspec": { + "display_name": "Python 3", + "language": "python", + "name": "python3" + }, + "language_info": { + "codemirror_mode": { + "name": "ipython", + "version": 3 + }, + "file_extension": ".py", + "mimetype": "text/x-python", + "name": "python", + "nbconvert_exporter": "python", + "pygments_lexer": "ipython3", + "version": "3.5.2" + } + }, + "nbformat": 4, + "nbformat_minor": 2 +} diff --git a/readGit.py b/readGit_rdabbs1.py similarity index 87% rename from readGit.py rename to readGit_rdabbs1.py index 0181eed..644ccb7 100644 --- a/readGit.py +++ b/readGit_rdabbs1.py @@ -2,18 +2,21 @@ import datetime from requests.auth import HTTPBasicAuth import requests +gleft = 1500 -client = pymongo.MongoClient () -#client = pymongo.MongoClient (host="da1.eecs.utk.edu") -login = "your ghid" -passwd = "your ghpassword" +#client = pymongo.MongoClient () +client = pymongo.MongoClient (host="da1.eecs.utk.edu") +login = sys.argv[1] +passwd = sys.argv[2] + +print(passwd) baseurl = 'https://api.github.com/repos' headers = {'Accept': 'application/vnd.github.v3.star+json'} headers = {'Accept': 'application/vnd.github.hellcat-preview+json'} -db=client['fdac18mps'] # added in class -collName = 'releases_yourutkid' +db = client['fdac18mp2'] # added in class +collName = 'releases_rdabbs1' coll = db [collName] def wait (left): while (left < 20): @@ -93,12 +96,14 @@ def chunks(l, n): if n < 1: n = 1 return [l[i:i + n] for i in range(0, len(l), n)] -def getReleases(n): +for n in sys.stdin.readlines(): #first clean the url + n = n.rstrip() n = re.sub("^.*github.com/","",n) n = re.sub("\.git$","",n) - url = baseurl + '/' + n + '/' + releases + url = baseurl + '/' + n + '/releases' url1 = url + print("trying to get: " + url1) v = [] size = 0 try: @@ -113,12 +118,11 @@ def getReleases(n): if len (v) > 0: # size may be bigger in bson, factor of 2 doesnot always suffice if (size < 16777216/3): - print (v)# - _one ( { 'name': n, 'url': url, 'utc':ts, 'values': v } ) + coll.insert_one ( { 'name': n, 'url': url, 'utc':ts, 'values': v } ) else: s = size; n = 3*s/16777216 i = 0 for ch in chunks (v, n): - #coll.insert_one ( { 'chunk': i, 'name':n, 'url': url, 'utc':ts, 'values': ch } ) + coll.insert_one ( { 'chunk': i, 'name':n, 'url': url, 'utc':ts, 'values': ch } ) i = i + 1 diff --git a/readNpm.py b/readNpm_rdabbs1.py similarity index 82% rename from readNpm.py rename to readNpm_rdabbs1.py index 9263e6b..c031286 100644 --- a/readNpm.py +++ b/readNpm_rdabbs1.py @@ -2,14 +2,14 @@ from urllib.parse import quote #for da2 -#client = pymongo .MongoClient (host="da1.eecs.utk.edu") +client = pymongo.MongoClient(host="da1.eecs.utk.edu") #for gcloud machine -client = pymongo .MongoClient () +#client = pymongo .MongoClient () -db = client ['fdac18mp2'] +db = client['fdac18mp2'] #replace audris with your utkid -coll = db['npm_audris'] +coll = db['npm_rdabbs1'] pre = 'https://api.npms.io/v2/package/' @@ -31,7 +31,7 @@ def output(s, p): k1 = k.replace('$', 'DOLLARSIGN') k1 = k1.replace('.', 'PERIODSIGN') r1 [k1] = result_json [k] - coll .insert (r1, check_keys=False) + coll.insert_one (r1) output (0, pname) except: e = sys.exc_info()[0]