Repositories list

• DeNovoWEST

  Public
  Python

  •

  MIT License

  •7•23•2•0•Updated Sep 18, 2025Sep 18, 2025

• CNV-calling

  Public
  Perl

  •1•2•0•1•Updated Sep 12, 2025Sep 12, 2025

• CoNVex

  Public
  R

  •

  Other

  •0•0•0•0•Updated Aug 4, 2025Aug 4, 2025

• trio-dnm-calling

  Public
  Call DNMs in trios

  Perl

  •

  MIT License

  •0•2•0•0•Updated Jul 28, 2025Jul 28, 2025

• clinicalFilter

  Public
  Clinical filtering

  Python

  •2•0•0•0•Updated Apr 30, 2025Apr 30, 2025

• MAVEQC

  Public
  R

  •

  MIT License

  •4•0•0•0•Updated Dec 11, 2024Dec 11, 2024

• Saturation_Genome_Editing

  Public
  Codes and protocols for SGE projects

  Jupyter Notebook

  •

  MIT License

  •1•1•0•0•Updated Aug 22, 2023Aug 22, 2023

• indelible

  Public
  Structural Variation breakpoint discovery via adaptive learning

  Python

  •

  GNU General Public License v3.0

  •1•16•5•1•Updated Jul 6, 2023Jul 6, 2023

• indelible_paper

  Public
  Supporting code and data for the InDelible manuscript

  HTML

  •0•2•0•0•Updated Sep 6, 2021Sep 6, 2021

• UKBBFertility

  Public
  Supporting Code for "Sex-biased reduction in reproductive success drives selective constraint on human genes"

  HTML

  •

  GNU General Public License v3.0

  •1•6•0•0•Updated Aug 31, 2021Aug 31, 2021

• clinical-filter

  Public
  Note: will be deprecated soon. Filtering trio-based genetic variants in VCFs for clinical review

  Python

  •8•0•0•0•Updated Aug 18, 2020Aug 18, 2020

• MEIPaper

  Public
  HTML

  •

  GNU General Public License v3.0

  •1•0•0•0•Updated Oct 24, 2019Oct 24, 2019

• Retrogene

  Public
  Java

  •1•0•0•0•Updated Oct 16, 2019Oct 16, 2019