iSEE everything

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40 repositories

iSEEid
Public
R
•
Other
•0•2•0•1•Updated Jul 31, 2025Jul 31, 2025
iUSEiSEE
Public
A workshop to learn how to use the iSEE package
TeX
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Other
•0•1•0•1•Updated Jul 28, 2025Jul 28, 2025
iSEE
Public
R/shiny interface for interactive visualization of data in SummarizedExperiment objects
visualization gui shiny clustering gene-expression feature-extraction transcriptomics single-cell hacktoberfest dimension-reduction
R
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Other
•43•228•28•1•Updated Jul 8, 2025Jul 8, 2025
shinylive-iSEE
Public
Demonstration of shinylive for running iSEE
R
•0•1•1•0•Updated Jun 1, 2025Jun 1, 2025
iSEE.github.io
Public
Quarto website
bioconductor hacktoberfest isee
CSS
•0•0•19•0•Updated Apr 7, 2025Apr 7, 2025
iSEEhub
Public
Custom landing page for iSEE and the Bioconductor ExperimentHub
bioconductor hacktoberfest isee bioconductor-package
R
•0•3•0•0•Updated Feb 13, 2025Feb 13, 2025
iSEEu
Public
The iSEE Universe
hacktoberfest
R
•
MIT License
•7•9•1•2•Updated Dec 11, 2024Dec 11, 2024
iSEEde
Public
iSEE extension for panels related to differential expression analysis
bioconductor hacktoberfest iseeu
R
•1•1•4•0•Updated Nov 3, 2024Nov 3, 2024
iSEEhex
Public
iSEE extension for summarising data points in hexagonal bins
bioconductor shiny-r iseeu
R
•0•0•2•0•Updated Oct 18, 2024Oct 18, 2024
iSEEindex
Public
iSEE extension for a landing page to a custom collection of data sets
bioconductor hacktoberfest
R
•5•2•3•0•Updated Oct 18, 2024Oct 18, 2024
iSEEpathways
Public
iSEE extension for panels related to pathway analysis
bioconductor hacktoberfest isee iseeu
R
•0•2•0•0•Updated Oct 16, 2024Oct 16, 2024
iSEEverse
Public
Easily install and load the entire iSEEverse
R
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Other
•0•0•0•0•Updated Sep 11, 2024Sep 11, 2024
iSEEtheTeam
Public
R
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Other
•0•0•0•0•Updated Sep 6, 2024Sep 6, 2024
iSEEDemoEuroBioC2024
Public
Package demo for the European Bioconductor Meeting 2024 (Oxford, UK)
workshop bioconductor
CSS
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Other
•0•0•0•0•Updated Sep 5, 2024Sep 5, 2024
awesome-isee-apps
Public
List of known iSEE apps publicly deployed
0•0•0•0•Updated Apr 9, 2024Apr 9, 2024
iSEElogin
Public
iSEE extension for a landing page presenting a login form
R
•0•0•0•0•Updated Apr 8, 2024Apr 8, 2024
usage
Public
Usage statistics
R
•0•0•0•0•Updated Nov 21, 2023Nov 21, 2023
iSEEdemo
Public
Dockerfile
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Other
•0•1•0•0•Updated Nov 14, 2023Nov 14, 2023
iSEETheBook
Public
bioconductor isee
TeX
•0•0•1•0•Updated Oct 25, 2023Oct 25, 2023
iSEEDemoEuroBioC2023
Public
iSEE package demo at EuroBioC2023
Dockerfile
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Other
•0•1•0•0•Updated Sep 12, 2023Sep 12, 2023
shinyappsio-iSEEindex-demo
Public
Demonstration app for iSEEindex on ShinyApps.io
R
•0•1•0•0•Updated Jun 16, 2023Jun 16, 2023
iSEEWorkshop2020
Public
Workshop on interactive analysis of SummarizedExperiment objects with iSEE
TeX
•
Creative Commons Attribution Share Alike 4.0 International
•5•10•3•1•Updated May 19, 2023May 19, 2023
iSEE_instances
Public
A gallery-repository to store the commands to reproduce entire analyses for iSEE instances on public/own data
0•4•0•1•Updated Apr 5, 2023Apr 5, 2023
iSEEWorkshopEuroBioc2020
Public
Workshop on interactive analysis of SummarizedExperiment objects with iSEE for EuroBioc2020
workshop bioconductor isee pkgdown iseeu
CSS
•
Creative Commons Attribution Share Alike 4.0 International
•1•0•2•1•Updated Dec 31, 2022Dec 31, 2022
screenshots
Public
Generate screenshots for iSEE documentation
Dockerfile
•0•0•0•1•Updated Nov 24, 2022Nov 24, 2022
iSEEBase
Public
iSEEBase: Base functions and classes for iSEE
R
•0•0•0•0•Updated Oct 10, 2022Oct 10, 2022
iSEEGenerics
Public
Defines S4 generic functions used in iSEE
isee bioconductor-package iseeu
R
•0•0•0•0•Updated Oct 9, 2022Oct 9, 2022
iSEEwidgets
Public
Shiny widgets developed for iSEE
hacktoberfest
R
•0•0•0•0•Updated Oct 9, 2022Oct 9, 2022
iSEEdebug
Public
Repositories of scripts to investigate and debug issues in iSEE apps.
R
•0•0•0•0•Updated Oct 4, 2022Oct 4, 2022
SimpleScreenshots
Public
Source code for applications to screenshot
hacktoberfest
R
•0•0•0•0•Updated Oct 19, 2021Oct 19, 2021