X-MindFlow

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27 repositories

DKParcellationdMRI
Public
Official repository of the paper titled "Deep Learning-Based Desikan-Killiany Parcellation of the Brain Using Diffusion MRI"
Python
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Apache License 2.0
•0•0•0•0•Updated Oct 16, 2025Oct 16, 2025
LHUNet
Public
LHU-Net: A Lean Hybrid U-Net for Cost-efficient, High-performance Volumetric Medical Image Segmentation
deep-learning medical-imaging segmentation hybrid synapse acdc brats cost-efficiency lhu-net lhunet
Python
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Apache License 2.0
•4•52•1•0•Updated Oct 16, 2025Oct 16, 2025
SSCT
Public
[ICCV 2023] Self-supervised Semantic Segmentation: Consistency over Transformation
skin transformers segmentation lung-segmentation self-supervised medical-image-segmentation skin-lesion-segmentation deformable-convolution
Jupyter Notebook
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MIT License
•2•24•0•0•Updated Oct 11, 2025Oct 11, 2025
MSA-2Net
Public
[BMVC 2024] Official repository of the paper titled "MSA^2 Net: Multi-scale Adaptive Attention-guided Network for Medical Image Segmentation"
computer-vision deep-learning transformers attention-mechanism synapse medical-image-segmentation receptive-field isic-2018
Python
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MIT License
•4•60•2•0•Updated Oct 2, 2025Oct 2, 2025
cenet
Public
[MICCAI 2025] CENet: Context Enhancement Network for Medical Image Segmentation
deep-learning synapse medical-image-segmentation ham10000 ph2-dataset
Python
•0•23•3•0•Updated Sep 10, 2025Sep 10, 2025
BrainCL
Public
Official repository of the paper titled "Modality-Agnostic Brain Lesion Segmentation with Privacy-aware Continual Learning"
neuroimaging segmentation continual-learning variable-modality
Jupyter Notebook
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Apache License 2.0
•0•8•0•0•Updated Jul 31, 2025Jul 31, 2025
Awesome_Mamba
Public
Computation-Efficient Era: A Comprehensive Survey of State Space Models in Medical Image Analysis
natural-language-processing computer-vision deep-learning time-series survey medical-imaging remote-sensing speech-processing mamba medical-image-processing
MIT License
•18•256•1•0•Updated Jul 22, 2025Jul 22, 2025
INCODE
Public
[WACV 2024] INCODE: Implicit Neural Conditioning with Prior Knowledge Embeddings
mlp sdf siren super-resolution nerf inpainting denoising inr ct-reconstruction image-representation
Jupyter Notebook
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MIT License
•8•48•2•0•Updated Jan 16, 2025Jan 16, 2025
Met-Seg
Public
Official repository of the paper titled "Segmentation of Brain Metastases in MRI: A Two-Stage Deep Learning Approach with Modality Impact Study"
Python
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Apache License 2.0
•3•9•0•0•Updated Aug 10, 2024Aug 10, 2024
DermoSegDiff
Public
[MICCAI 2023] DermoSegDiff: A Boundary-aware Segmentation Diffusion Model for Skin Lesion Delineation
skin deep-learning segmentation diffusion isic diffusion-models ham10000 skin-lesion-segmentation ddpm ph2
Python
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MIT License
•15•81•0•2•Updated Jun 27, 2024Jun 27, 2024
Awesome-Foundation-Models-in-Medical-Imaging
Public
A curated list of foundation models for vision and language tasks in medical imaging
sam medical medical-imaging medical-image-processing medical-image-analysis foundation-models
MIT License
•19•277•0•1•Updated Jun 3, 2024Jun 3, 2024
uncertainty3D
Public
Reducing Uncertainty in 3D Medical Image Segmentation
Python
•0•1•0•0•Updated Mar 23, 2024Mar 23, 2024
deformableLKA
Public
[WACV 2024] Beyond Self-Attention: Deformable Large Kernel Attention for Medical Image Segmentation
deep-learning transformers segmentation synapse 3d-segmentation pancreas skin-lesion-segmentation 2d-segmentation
Python
•19•242•12•0•Updated Feb 7, 2024Feb 7, 2024
WaveFormer
Public
[MICCAI 2023] Unlocking Fine-Grained Details with Wavelet-based High-Frequency Enhancement in Transformers
transformer segmentation deeplearning wavelet multi-organ-segmentation high-frequency isic-2018 synapse-dataset
Python
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MIT License
•3•27•0•0•Updated Dec 23, 2023Dec 23, 2023
TransCeption
Public
Official code for Enhancing Medical Image Segmentation with TransCeption: A Multi-Scale Feature Fusion Approach
transformer segmentation inception hierarchical-attention-networks medical-image-segmentation unet-segmentation
Jupyter Notebook
•3•51•3•0•Updated Dec 17, 2023Dec 17, 2023
Awesome-Implicit-Neural-Representations-in-Medical-imaging
Public
[ICCV 2023] A curated list of resources on implicit neural representations in Medical Imaging
compression deep-learning rendering medical medical-imaging registration synthesis segmentation reconstruction nerf
19•225•1•0•Updated Dec 6, 2023Dec 6, 2023
FuseNet
Public
[ISBI 2024] FuseNet: Self-Supervised Dual-Path Network for Medical Image Segmentation
deep-learning medical segmentation skin-segmentation lung-segmentation self-supervised self-supervised-learning
Jupyter Notebook
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MIT License
•5•22•0•0•Updated Nov 25, 2023Nov 25, 2023
HCA-Net
Public
[ISBI 2024] HCA-Net: Hierarchical Context Attention Network for Intervertebral Disc Semantic Labeling
deeplearning hourglass-network semantic-labeling intervertebral-disc intervertebral hirarchical-attention
Python
•1•9•0•0•Updated Nov 24, 2023Nov 24, 2023
SSL-contrastive
Public
[ISBI 2024] Leveraging Unlabeled Data for 3D Medical Image Segmentation through Self-Supervised Contrastive Learning
deep-learning medical-imaging semi-supervised-learning segmentation 3d pancreas contrastive-learning selfsupervised pancreas-segmentation
Python
•1•25•1•0•Updated Nov 23, 2023Nov 23, 2023
Awesome-Transformer-in-Medical-Imaging
Public
[MedIA Journal] An ultimately comprehensive paper list of Vision Transformer/Attention, including papers, codes, and related websites
computer-vision deep-learning transformers transformer awesome-list segmentation vit attention-mechanism medical-image-segmentation vision-transformer
GNU General Public License v3.0
•25•208•0•0•Updated Nov 10, 2023Nov 10, 2023
xmindflow.github.io
Public
HTML
•0•0•0•0•Updated Nov 1, 2023Nov 1, 2023
Annotation-Free-Fewshot
Public
[MICCAI 2023] Self-supervised Few-shot Learning for Semantic Segmentation: An Annotation-free Approach
segmentation few-shot self-supervised-learning
Python
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MIT License
•2•21•1•0•Updated Oct 17, 2023Oct 17, 2023
Laplacian-Former
Public
[MICCAI 2023] Laplacian-Former: Overcoming the Limitations of Vision Transformers in Local Texture Detection
skin frequency transformer segmentation deeplearning synapse laplacian-pyramid efficient-transformer
Python
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MIT License
•3•17•0•0•Updated Oct 12, 2023Oct 12, 2023
DAEFormer
Public
[MICCAI 2023] DAE-Former: Dual Attention-guided Efficient Transformer for Medical Image Segmentation
deep-learning pytorch transformer segmentation medical-image-analysis medical-image-segmentation unet-image-segmentation efficient-transformers
Python
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MIT License
•13•122•12•0•Updated Oct 12, 2023Oct 12, 2023
FastMedSAM
Public
Fast Medical Segment Anything
Python
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Apache License 2.0
•742•3•0•0•Updated Sep 15, 2023Sep 15, 2023
MMCFormer
Public
[MIDL 2023] MMCFormer: Missing Modality Compensation Transformer for Brain Tumor Segmentation
transformers segmentation brain brats brain-tumor-segmentation missing-modality
Python
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MIT License
•3•20•1•0•Updated Jul 10, 2023Jul 10, 2023
MS-Former
Public
[MIDL 2023] MS-Former: Multi-Scale Self-Guided Transformer for Medical Image Segmentation
skin transformers medical segmentation self-supervised
Jupyter Notebook
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MIT License
•5•15•1•0•Updated Jul 10, 2023Jul 10, 2023