GitHub Actions: Installing dependencies with mamba >0.20.0 fails #69
Description
Produces the following error report:
# >>>>>>>>>>>>>>>>>>>>>> ERROR REPORT <<<<<<<<<<<<<<<<<<<<<<
Traceback (most recent call last):
File "/usr/share/miniconda/lib/python3.9/site-packages/conda/exceptions.py", line 10[8](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:8)2, in __call__
return func(*args, **kwargs)
File "/usr/share/miniconda/lib/python3.[9](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:9)/site-packages/conda_env/cli/main.py", line 80, in do_call
exit_code = getattr(module, func_name)(args, parser)
File "/usr/share/miniconda/lib/python3.9/site-packages/conda_env/cli/main_update.py", line 126, in execute
result[installer_type] = installer.install(prefix, specs, args, env)
File "/usr/share/miniconda/lib/python3.9/site-packages/mamba/mamba_env.py", line 53, in mamba_install
index = load_channels(pool, channel_urls, repos, prepend=False)
File "/usr/share/miniconda/lib/python3.9/site-packages/mamba/utils.py", line 122, in load_channels
index = get_index(
File "/usr/share/miniconda/lib/python3.9/site-packages/mamba/utils.py", line [10](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:10)3, in get_index
is_downloaded = dlist.download(api.MAMBA_DOWNLOAD_FAILFAST)
RuntimeError: Operation not permitted: '/usr/share/miniconda/pkgs/cache/3e39a7aa.json'
`$ /usr/share/miniconda/bin/mamba update --file environment-test.yml --name base`
environment variables:
CIO_TEST=<not set>
CONDA=/usr/share/miniconda
CONDA_AUTO_UPDATE_CONDA=false
CONDA_ROOT=/usr/share/miniconda
CURL_CA_BUNDLE=<not set>
DEPLOYMENT_BASEPATH=/opt/runner
GITHUB_EVENT_PATH=/home/runner/work/_temp/_github_workflow/event.json
GITHUB_PATH=/home/runner/work/_temp/_runner_file_commands/add_path_cb8069e7-8d39-4
61e-8f9c-aa9c0a9dc8aa
PATH=/usr/share/miniconda/bin:/home/linuxbrew/.linuxbrew/bin:/home/linuxbre
w/.linuxbrew/sbin:/home/runner/.local/bin:/opt/pipx_bin:/home/runner/.
cargo/bin:/home/runner/.config/composer/vendor/bin:/usr/local/.ghcup/b
in:/home/runner/.dotnet/tools:/snap/bin:/usr/local/sbin:/usr/local/bin
:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin
REQUESTS_CA_BUNDLE=<not set>
SELENIUM_JAR_PATH=/usr/share/java/selenium-server.jar
SSL_CERT_FILE=<not set>
SWIFT_PATH=/usr/share/swift/usr/bin
active environment : None
user config file : /home/runner/.condarc
populated config files :
conda version : 4.[12](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:12).0
conda-build version : not installed
python version : 3.9.7.final.0
virtual packages : __linux=5.[13](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:13).0=0
__glibc=2.31=0
__unix=0=0
__archspec=1=x86_64
base environment : /usr/share/miniconda (writable)
conda av data dir : /usr/share/miniconda/etc/conda
conda av metadata url : None
channel URLs : https://repo.anaconda.com/pkgs/main/linux-64
https://repo.anaconda.com/pkgs/main/noarch
https://repo.anaconda.com/pkgs/r/linux-64
https://repo.anaconda.com/pkgs/r/noarch
package cache : /usr/share/miniconda/pkgs
/home/runner/.conda/pkgs
envs directories : /usr/share/miniconda/envs
/home/runner/.conda/envs
platform : linux-64
user-agent : conda/4.12.0 requests/2.27.1 CPython/3.9.7 Linux/5.13.0-1022-azure ubuntu/[20](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:20).04.4 glibc/2.31
UID:GID : 1001:1[21](https://github.com/hinerm/jgo/runs/6309610914?check_suite_focus=true#step:5:21)
netrc file : None
offline mode : False
An unexpected error has occurred. Conda has prepared the above report.
Error: Process completed with exit code 1.