Epidemiology 756: Intro to Infectious Disease Modeling and Simulation in R

Installing These Materials

First, install Rstudio per Intro Slides.

Then use Rstudio "New Project" capability to checkout this repository:

Step 4: then fill in the URL from this repository: https://github.com/ACCIDDA/epid756

Name		Name	Last commit message	Last commit date
Latest commit History 8 Commits
data		data
img		img
.gitignore		.gitignore
01_Intro.R		01_Intro.R
01_Intro.Rmd		01_Intro.Rmd
02_BaseR.R		02_BaseR.R
03_Functions.R		03_Functions.R
03_Functions_answers.R		03_Functions_answers.R
03_UsefulFunctions.md		03_UsefulFunctions.md
04_Tidyverse.R		04_Tidyverse.R
04_TidyverseResources.md		04_TidyverseResources.md
05_ExampleFuncs.R		05_ExampleFuncs.R
05_WithFuncs.R		05_WithFuncs.R
05_WithoutFuncs.R		05_WithoutFuncs.R
06_Compartmental.R		06_Compartmental.R
06_sir_function.R		06_sir_function.R
06_sir_model_analysis.Rmd		06_sir_model_analysis.Rmd
06_sir_model_analysis_solutions.Rmd		06_sir_model_analysis_solutions.Rmd
07_OtherModeling.md		07_OtherModeling.md
07_Potpourri.R		07_Potpourri.R
08_ModelCode.R		08_ModelCode.R
08_SourcesOfUncertainty.qmd		08_SourcesOfUncertainty.qmd
09_ModelCode_StochLecture_Complete.R		09_ModelCode_StochLecture_Complete.R
09_ModelCode_StochLecture_Skeleton.R		09_ModelCode_StochLecture_Skeleton.R
10_ChainBinomial.Rmd		10_ChainBinomial.Rmd
10_ChainBinomial_functions.R		10_ChainBinomial_functions.R
11_AgentBasedModels.qmd		11_AgentBasedModels.qmd
README.md		README.md