Feat 932 ebrains adpater

applications/backoffice/src/apiclient/workspaces/models/RepositoryType.ts

@@ -23,7 +23,9 @@
 export enum RepositoryType {
     Dandi = 'dandi',
     Figshare = 'figshare',
-    Github = 'github'
+    Github = 'github',
+    Biomodels = 'biomodels',
+    EBRAINS = "ebrains"
 }
 
 export function RepositoryTypeFromJSON(json: any): RepositoryType {

applications/osb-portal/src/apiclient/workspaces/models/EBRAINSRepositoryResource.ts

@@ -0,0 +1,96 @@
+/* tslint:disable */
+/* eslint-disable */
+/**
+ * OSB Workspaces manager API
+ * Opensource Brain Platform - Reference Workspaces manager API
+ *
+ * The version of the OpenAPI document: 0.2.0
+ * 
+ *
+ * NOTE: This class is auto generated by OpenAPI Generator (https://openapi-generator.tech).
+ * https://openapi-generator.tech
+ * Do not edit the class manually.
+ */
+
+import { exists, mapValues } from '../runtime';
+import {
+    RepositoryResourceBase,
+    RepositoryResourceBaseFromJSON,
+    RepositoryResourceBaseFromJSONTyped,
+    RepositoryResourceBaseToJSON,
+} from './';
+
+/**
+ * figshare repository resource
+ * @export
+ * @interface EBRAINSRepositoryResource
+ */
+export interface EBRAINSRepositoryResource {
+    /**
+     * file name
+     * @type {string}
+     * @memberof EBRAINSRepositoryResource
+     */
+    name?: string;
+    /**
+     * Download URL of the Resource
+     * @type {string}
+     * @memberof EBRAINSRepositoryResource
+     */
+    path?: string;
+    /**
+     * OSB Repository id
+     * @type {number}
+     * @memberof EBRAINSRepositoryResource
+     */
+    osbrepositoryId?: number;
+    /**
+     * File size in bytes of the RepositoryResource
+     * @type {number}
+     * @memberof EBRAINSRepositoryResource
+     */
+    size?: number;
+    /**
+     * Date/time the ReposityResource is last modified
+     * @type {Date}
+     * @memberof EBRAINSRepositoryResource
+     */
+    timestampModified?: Date;
+}
+
+export function EBRAINSRepositoryResourceFromJSON(json: any): EBRAINSRepositoryResource {
+    return EBRAINSRepositoryResourceFromJSONTyped(json, false);
+}
+
+export function EBRAINSRepositoryResourceFromJSONTyped(json: any, ignoreDiscriminator: boolean): EBRAINSRepositoryResource {
+    if ((json === undefined) || (json === null)) {
+        return json;
+    }
+    return {
+
+        'name': !exists(json, 'name') ? undefined : json['name'],
+        'path': !exists(json, 'path') ? undefined : json['path'],
+        'osbrepositoryId': !exists(json, 'osbrepository_id') ? undefined : json['osbrepository_id'],
+        'size': !exists(json, 'size') ? undefined : json['size'],
+        'timestampModified': !exists(json, 'timestamp_modified') ? undefined : (new Date(json['timestamp_modified'])),
+    };
+}
+
+export function EBRAINSRepositoryResourceToJSON(value?: EBRAINSRepositoryResource | null): any {
+    if (value === undefined) {
+        return undefined;
+    }
+    if (value === null) {
+        return null;
+    }
+    return {
+
+        'name': value.name,
+        'path': value.path,
+        'osbrepository_id': value.osbrepositoryId,
+        'size': value.size,
+        'timestamp_modified': value.timestampModified === undefined ? undefined : (value.timestampModified.toISOString()),
+    };
+}
+
+

applications/osb-portal/src/apiclient/workspaces/models/RepositoryType.ts

@@ -17,14 +17,17 @@
  *   * dandi - DANDI repository
  *   * figshare - FigShare repository
  *   * github - Github repository
+ *   * biomodels - Biomodels repository
+ *   * ebrains - EBRAINS repository
  * @export
  * @enum {string}
  */
 export enum RepositoryType {
     Dandi = 'dandi',
     Figshare = 'figshare',
     Github = 'github',
-    Biomodels = 'biomodels'
+    Biomodels = 'biomodels',
+    EBRAINS = 'ebrains'
 }
 
 export function RepositoryTypeFromJSON(json: any): RepositoryType {

applications/osb-portal/src/apiclient/workspaces/models/index.ts

@@ -1,4 +1,5 @@
 export * from './BiomodelsRepositoryResource';
+export * from './EBRAINSRepositoryResource';
 export * from './DandiRepositoryResource';
 export * from './DownloadResource';
 export * from './FigshareRepositoryResource';

applications/osb-portal/src/pages/RepositoryPage.tsx

@@ -264,6 +264,10 @@ export const RepositoryPage = (props: any) => {
           "_blank"
         );
         break;
+      // For figshare, there does not seem to be a version specific URL
+      case "ebrains":
+        window.open(`${repository.uri}`, "_blank");
+        break;
       default:
         window.open(`#`, "_blank");
     }

applications/workspaces/api/openapi.yaml

@@ -994,6 +994,7 @@ components:
                 - figshare
                 - github
                 - biomodels
+                - ebrains
             type: string
         RepositoryContentType:
             description: |
@@ -1293,6 +1294,16 @@ components:
                         sha:
                             description: The GIT sha of the resource
                             type: string
+        BiomodelsRepositoryResource:
+            description: biomodels repository resource
+            allOf:
+                -
+                    $ref: '#/components/schemas/RepositoryResourceBase'
+        EBRAINSRepositoryResource:
+            description: EBRAINS repository resource
+            allOf:
+                -
+                    $ref: '#/components/schemas/RepositoryResourceBase'
         DownloadResource:
             description: Download Resource (files/folders)
             allOf:
@@ -1506,11 +1517,6 @@ components:
                                 $ref: '#/components/schemas/Tag'
                             -
                                 x-secondary: osbrepository_tag
-        BiomodelsRepositoryResource:
-            description: figshare repository resource
-            allOf:
-                -
-                    $ref: '#/components/schemas/RepositoryResourceBase'
     securitySchemes:
         bearerAuth:
             scheme: bearer

applications/workspaces/server/requirements.txt

@@ -15,6 +15,7 @@ cryptography==43.0.3
 debugpy==1.8.9
 deprecation==2.1.0
 durationpy==0.9
+fairgraph==0.12.2
 Flask==2.2.5
 Flask-Cors==5.0.0
 Flask-SQLAlchemy==3.0.2
@@ -75,4 +76,4 @@ types-toml==0.10.8.20240310
 typing_extensions==4.12.2
 urllib3==2.0.7
 websocket-client==1.8.0
-Werkzeug==2.2.3
+Werkzeug==2.2.3

applications/workspaces/server/workspaces/models/__init__.py

@@ -46,3 +46,4 @@
 from workspaces.models.workspace_resource_entity_all_of import WorkspaceResourceEntityAllOf
 from workspaces.models.repository_info import RepositoryInfo
 from workspaces.models.biomodels_repository_resource import BiomodelsRepositoryResource
+from workspaces.models.ebrains_repository_resource import EBRAINSRepositoryResource