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AlignmentProcessor0.8

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@icwells icwells released this 28 Apr 00:12
· 59 commits to master since this release

The program will now remove sequences with premature stop codons by default, and will produce a list of all genes which contained them.
The program will now produce error messages if the wrong file conversion is used for an analysis or if KaKs_Calculator or PAML are not installed in the proper directories.
The 02_namesList.txt file can now be printed to the terminal via the command line and new entries can be appended to it.