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simulated data

Status: Open.

#2671 In alexdobin/STAR;

· 1690078218 opened on Oct 28, 2025

Cannot build index

Status: Open.

#2669 In alexdobin/STAR;

· nguyen-ngoc-dat opened on Oct 22, 2025

The newest version of STAR in bioconda channel can't receive any reads

Status: Open.

#2668 In alexdobin/STAR;

· falsetry1514 opened on Oct 21, 2025

lot of multi-maaping-hg_38 genome mapping

Status: Open.

#2667 In alexdobin/STAR;

· Aastha2000tanu opened on Oct 17, 2025

Sequencing saturation changed after adding --soloCBmatchWLtype 1MM_multi_Nbase_pseudocounts

Status: Open.

#2665 In alexdobin/STAR;

· Liripo opened on Sep 29, 2025

GA fails on macOS due to <code>Failed spawning readFilesCommand</code>

Status: Open.

#2663 In alexdobin/STAR;

· eboileau opened on Sep 23, 2025

STAR/STARlong is not working with PacBio Isoseq reads

Status: Open.

#2662 In alexdobin/STAR;

· biofcallejas opened on Sep 19, 2025

Generate *.SJ.out.tab using markduplicated reads

Status: Open.

#2660 In alexdobin/STAR;

· senzhaocode opened on Sep 1, 2025

Compute single-cell gene count matrix from a BAM file

Status: Open.

#2659 In alexdobin/STAR;

· edg1983 opened on Aug 26, 2025

Error using CellRanger BAM as input for STARsolo

Status: Open.

#2658 In alexdobin/STAR;

· qwelongh opened on Aug 25, 2025

STAR-2.7.11b: Segfault in sjdbBuildIndex() -&gt; funCalcSAi()

Status: Open.

#2657 In alexdobin/STAR;

· rowanworth opened on Aug 20, 2025

Slightly different SJs from first pass of twopassMode Basic versus manually running STAR 1-pass (with parameters supposedly modified to match)

Status: Open.

#2656 In alexdobin/STAR;

· hmgeiger opened on Aug 19, 2025