Search results

process_consequences filters some variants unexpectedly

annotation

bug

Status: Open.

Bug

#805 In broadinstitute/gnomad_methods;

· mike-w-wilson opened on Sep 24, 2025

A future update to hail will cause issues installing <code>gnomad_methods</code> on dataproc

Status: Open.

#796 In broadinstitute/gnomad_methods;

· chrisvittal opened on Jul 31, 2025

Investigate performance and AC+AF cutoffs for LD Code

Status: Open.

#756 In broadinstitute/gnomad_methods;

· matren395 opened on Jan 23, 2025

Document or update split_vds_by_strata to more accurately reflect behavior

enhancement

Kaizen

Status: Open.

#683 In broadinstitute/gnomad_methods;

· mike-w-wilson opened on Mar 7, 2024

Improve getting started documentation

Kaizen

Status: Open.

#343 In broadinstitute/gnomad_methods;

· nawatts opened on Mar 3, 2021

Add class to handle KeyErrors in VersionedResources

Kaizen

Status: Open.

#287 In broadinstitute/gnomad_methods;

· mike-w-wilson opened on Jan 28, 2021

Allow customizing message for Slack notifications

Kaizen

Status: Open.

#229 In broadinstitute/gnomad_methods;

· nawatts opened on May 18, 2020

Logging strategy

Kaizen

Status: Open.

#166 In broadinstitute/gnomad_methods;

· lfrancioli opened on Feb 13, 2020

Add reference liftover chain file check and standardization

Kaizen

Status: Open.

#162 In broadinstitute/gnomad_methods;

· mike-w-wilson opened on Feb 11, 2020