Skip to content
View dadrasarmin's full-sized avatar
๐ŸŒฑ
๐ŸŒฑ

Block or report dadrasarmin

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this userโ€™s behavior. Learn more about reporting abuse.

Report abuse
dadrasarmin/README.md

๐Ÿ’ซ About Me:

I am a Project Manager of the European Galaxy Team at the University of Freiburg, working as part of the EuroScienceGateway project.

My academic background is in evolutionary biology, with a PhD focused on the terrestrialization of land plants. I investigated gene expression patterns in land plants and their closest algal relatives, Zygnematophyceae, using co-expression network analysis.

I have a diverse programming background. I began with C++, building small projects to learn core concepts, and later expanded into Python for data analysisโ€”developing projects such as a chatroom and a simple multiplayer game. During my PhD, I primarily used R and Bash, leveraging Snakemake to orchestrate workflows on HPC servers and performing statistical analyses locally in R.

๐ŸŒ Socials:

LinkedIn Bluesky Mastodon

๐Ÿ’ป Tech Stack:

Markdown LaTeX R Python Bash Script Anaconda Qt Adobe InDesign Adobe Photoshop Canva Affinity Designer Gimp Inkscape NumPy Matplotlib Pandas Plotly Scipy scikit-learn Git GitHub GitLab Docker Jira Confluence

๐Ÿ“Š GitHub Stats:



๐Ÿ† GitHub Trophies

โœ๏ธ Random Dev Quote

๐Ÿ” Top Contributed Repo


Popular repositories Loading

  1. enrichment_analysis_for_non_model_organism enrichment_analysis_for_non_model_organism Public

    In this repo, I explain how can we use clusterProfiler and Tidyverse to perform (GO or KEGG) enrichment analysis in R.

    R 22 1

  2. rnaseq_quantification_kallisto_pipeline rnaseq_quantification_kallisto_pipeline Public

    This it the pipeline I use frequently to perform QC, filtering and trimming, and quantification of raw RNA-Seq reads.

    Shell 3 2

  3. Response_to_a_gradient_of_environmental_cues_in_mesotaenium_endlicherianum Response_to_a_gradient_of_environmental_cues_in_mesotaenium_endlicherianum Public

    Forked from deVries-lab/Response_to_a_gradient_of_environmental_cues_in_mesotaenium_endlicherianum

    In this repository we deployed the codes we used to perform bioinformatic analyses for the paper "Response_to_a_gradient_of_environmental_cues_in_mesotaenium_endlicherianum"

    HTML 2

  4. high-throughput_blast high-throughput_blast Public

    Here, I explain how to parallelize sequence similarity search using blast (or anything similar), if you have access to HPC or a big computer.

    1 2

  5. minimal-chatroom minimal-chatroom Public

    My first project for the advanced programming course - a minimal chatroom that has server side and client side implemented in c++ and Qt framework

    C++

  6. agar.io agar.io Public

    My second project for the advanced programming course - Agar.io is a game that has server side and client side implemented in c++ and Qt framework

    C++