Skip to content

Update README.rst #68

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 1 commit into
base: main
Choose a base branch
from
Open
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
3 changes: 1 addition & 2 deletions README.rst
Original file line number Diff line number Diff line change
Expand Up @@ -189,7 +189,6 @@ Computing the latent features for simulated or experimental particles can be don

import cryo_sbi.utils.estimator_utils as est_utils
latent_vecs = est_utils.compute_latent_repr(
compute_latent_repr(
estimator=posterior,
images=images,
batch_size=100,
Expand All @@ -201,7 +200,7 @@ After we computed the latent representation for the images, one possible way to
.. code:: python

import umap
reducer = umap.UMAP(metric="euclidian", n_components=2, n_neighbors=50)
reducer = umap.UMAP(metric="euclidean", n_components=2, n_neighbors=50)
embedding = reducer.fit_transform(latent_vecs.numpy())

We can quickly visualize the 2d latent space with matplotlib.
Expand Down