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@funkelab

Funke lab

Janelia Research Campus

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  1. gunpowder gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    Python 86 58

  2. lsd lsd Public

    🌈

    Python 64 39

  3. motile motile Public

    Multi-Object Tracker using Integer Linear Equations

    Python 38 5

  4. daisy daisy Public

    Block-wise task scheduling for large nD volumes.

    Python 32 18

  5. cellulus cellulus Public

    Unsupervised Instance Segmentation in Microscopy

    Python 24 3

  6. linajea linajea Public

    Python 18 7

Repositories

Showing 10 of 82 repositories
  • motile_tracker Public

    An application for interactive for tracking with motile

    funkelab/motile_tracker’s past year of commit activity
    Python 9 BSD-3-Clause 4 86 4 Updated Oct 14, 2025
  • finn Public

    finn is (not) napari

    funkelab/finn’s past year of commit activity
    Python 4 BSD-3-Clause 2 15 3 Updated Oct 13, 2025
  • funtracks Public

    A data model for cell tracking with actions, undo history, and more!

    funkelab/funtracks’s past year of commit activity
    Python 3 BSD-3-Clause 1 34 3 Updated Oct 13, 2025
  • motile Public

    Multi-Object Tracker using Integer Linear Equations

    funkelab/motile’s past year of commit activity
    Python 38 MIT 5 19 6 Updated Oct 13, 2025
  • lsd-lite Public

    Simple LSD and affinity graph computation

    funkelab/lsd-lite’s past year of commit activity
    Python 1 MIT 0 0 0 Updated Oct 10, 2025
  • lsd Public

    🌈

    funkelab/lsd’s past year of commit activity
    Python 64 MIT 39 3 2 Updated Oct 10, 2025
  • spatial_graph Public

    A spatial graph datastructure for python

    funkelab/spatial_graph’s past year of commit activity
    Python 8 MIT 2 6 2 Updated Oct 6, 2025
  • quac Public

    Quantitative Attributions with Counterfactuals

    funkelab/quac’s past year of commit activity
    Python 2 MIT 0 5 2 Updated Oct 6, 2025
  • gunpowder Public

    A library to facilitate machine learning on multi-dimensional images.

    funkelab/gunpowder’s past year of commit activity
    Python 86 MIT 58 12 1 Updated Oct 6, 2025
  • motile_tracker_bundled_app Public
    funkelab/motile_tracker_bundled_app’s past year of commit activity
    Python 0 GPL-3.0 0 0 1 Updated Oct 1, 2025
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