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Pull requests: galaxyproject/tools-iuc

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Pull requests list

Yahs : allow qname_sorted bam inputs
#7216 opened Aug 12, 2025 by Delphine-L Loading…
3 of 5 tasks
3
checkm: remove tool data
#7215 opened Aug 12, 2025 by bernt-matthias Loading…
3 of 5 tasks
Updating tools/ena_webin_cli from version 8.1.1 to 9.0.0
#7212 opened Aug 11, 2025 by gxydevbot Loading…
Busco (5.8.0) extra test to indicate bug
#7209 opened Aug 8, 2025 by lsterck Loading…
3 of 5 tasks
20
update ppanggolin suite
#7208 opened Aug 8, 2025 by thomas-lacroix Loading…
3 of 5 tasks
16
New tool addition: GAMMA , Gene Allele Mutation Microbial Assessment
#7206 opened Aug 6, 2025 by lsterck Loading…
3 of 5 tasks
[WIP] Add initial version of Samestr2 convert tool
#7196 opened Aug 4, 2025 by xens25 • Draft
5 tasks
upgraded nanoplot to 1.46.0
#7182 opened Jul 31, 2025 by lsterck Loading…
3 of 5 tasks
12
New tool addition: Mash dist
#7177 opened Jul 29, 2025 by SaimMomin12 Loading…
3 of 5 tasks
27
Updating tools/nanoplot from version 1.44.1 to 1.46.0
#7175 opened Jul 28, 2025 by gxydevbot Loading…
10
Add Galaxy wrapper for LEMUR: Latent Embedding Multivariate Regression
#7173 opened Jul 25, 2025 by dianichj Loading…
3 of 5 tasks
48
Updating tools/mzmine to 4.7.8
#7171 opened Jul 24, 2025 by SaimMomin12 • Draft
3 of 5 tasks
Add Galaxy wrapper for BiaPy tool
#7168 opened Jul 23, 2025 by danifranco Loading…
30
New Tool Addition: VIRULIGN, a tool for codon-correct pairwise alignments
#7167 opened Jul 23, 2025 by lsterck Loading…
3 of 5 tasks
23
CI: cover Rmd files with styler
#7164 opened Jul 21, 2025 by bernt-matthias Loading…
3 of 5 tasks
Update nextclade to version 3.15.3
#7161 opened Jul 21, 2025 by pvanheus Loading…
3 of 5 tasks
2
Updating tools/mzmine from version 3.9.0 to 4.7.27
#7159 opened Jul 21, 2025 by gxydevbot Loading…
4
Updating tools/artic from version 1.7.3 to 1.7.5
#7156 opened Jul 21, 2025 by gxydevbot Loading…
2
Linter fix: chewbacca
#7154 opened Jul 18, 2025 by bernt-matthias Loading…
3 of 5 tasks
2
Linter fix quast
#7152 opened Jul 18, 2025 by bernt-matthias • Draft
3 of 5 tasks
7
add alevin-fry
#7149 opened Jul 17, 2025 by dannyspadaro • Draft
3 of 5 tasks
Add MetaSBT tool suite
#7141 opened Jul 14, 2025 by cumbof Loading…
3 of 5 tasks
57
Bump busco to 6.0.0
#7139 opened Jul 14, 2025 by bernt-matthias Loading…
3 of 6 tasks
1
Updating tools/iqtree from version 2.4.0 to 3.0.1
#7134 opened Jul 14, 2025 by gxydevbot Loading…
Add compress option pairtool wrapper
#7127 opened Jul 9, 2025 by Smeds Loading…
5 tasks
26
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