Search results

Typo in Naming of Output Files in Ancestry Check Vignette Guide

Status: Open.

#57 In meyer-lab-cshl/plinkQC;

· fransbudiman opened on Apr 15, 2025

Typo in vignettes/HapMap.Rmd, wrong input file spelling

Status: Open.

#56 In meyer-lab-cshl/plinkQC;

· fransbudiman opened on Feb 16, 2025

Issue with PCA for chromosome X

Status: Open.

#55 In meyer-lab-cshl/plinkQC;

· Eyael-H opened on Oct 20, 2024

Issue with data pruning for ancestry estimation

Status: Open.

#54 In meyer-lab-cshl/plinkQC;

· safamajeed opened on Feb 15, 2024

possible issue with high-LD-regions-hg38-GRCh38.bed data

Status: Open.

#53 In meyer-lab-cshl/plinkQC;

· straubp-vandy opened on Nov 16, 2023

Negative chromosome X heterozygosities

Status: Open.

#52 In meyer-lab-cshl/plinkQC;

· fastforward35 opened on Nov 8, 2023

Negative Chr X heterozygosities

Status: Open.

#51 In meyer-lab-cshl/plinkQC;

· fastforward35 opened on Nov 8, 2023

Updates for Ancestry Estimation Vignette

Status: Open.

#50 In meyer-lab-cshl/plinkQC;

· carolinewalter5 opened on Dec 22, 2022

1000 Genomes phase 3 links have changed

Status: Open.

#49 In meyer-lab-cshl/plinkQC;

· mxhm opened on Jun 21, 2022

Error using the evaluate_check_ancestry function

Status: Open.

#48 In meyer-lab-cshl/plinkQC;

· boseb opened on Mar 25, 2022

Some questions about ancestry estimation

Status: Open.

#47 In meyer-lab-cshl/plinkQC;

· jordur opened on Feb 11, 2022