To run the notebooks, you can use one of the following options:
- Self-contained environment (recommended)
- Open in Google Colab or Binder (see table)
- You can also run the notebooks locally by cloning the repository and installing the required dependencies.
For local development, the next dependencies are required:
- Java 11
- Python 3.12 or later
- uv
Notebook | Google Colab |
---|---|
autoimmune_colocalisations.ipynb | |
autoimmune_credible_set.ipynb |