Skip to content

Notebook for sq.pp.filter_cells #148

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Open
wants to merge 14 commits into
base: main
Choose a base branch
from
Open

Notebook for sq.pp.filter_cells #148

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
14 commits
Select commit Hold shift + click to select a range
0aeff98
init
selmanozleyen Jul 9, 2025
275ca4e
update the notebook
selmanozleyen Jul 9, 2025
41af6ea
init version of mibitof with filtering labels
selmanozleyen Aug 4, 2025
4bfe726
add visium
selmanozleyen Aug 4, 2025
0a0300e
add stereoseq
selmanozleyen Aug 6, 2025
4c8d0b5
add dataset information to stereoseq
selmanozleyen Aug 6, 2025
e418b64
update notebooks
selmanozleyen Aug 6, 2025
32cc025
format other notebook
selmanozleyen Aug 6, 2025
bd2b729
add text to filter_cells
selmanozleyen Aug 6, 2025
af71a33
add text for mibitof
selmanozleyen Aug 6, 2025
e2ca53b
add text to stereoseq
selmanozleyen Aug 6, 2025
296295a
similarly for visium
selmanozleyen Aug 6, 2025
82439a7
push current state
selmanozleyen Aug 20, 2025
0ed5504
update mouse liver notebook
selmanozleyen Aug 21, 2025
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
327 changes: 327 additions & 0 deletions examples/preprocessing/filter_cells.ipynb
View file
Open in desktop

Large diffs are not rendered by default.

223 changes: 223 additions & 0 deletions examples/preprocessing/mibitof_filter_cells.ipynb
View file
Open in desktop

Large diffs are not rendered by default.

299 changes: 299 additions & 0 deletions examples/preprocessing/mouse_liver_filter_cells.ipynb
View file
Open in desktop

Large diffs are not rendered by default.

264 changes: 264 additions & 0 deletions examples/preprocessing/stereoseq_filter_cells.ipynb
View file
Open in desktop

Large diffs are not rendered by default.

Loading