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tiendu/README.md

πŸ‘‹ Hi, I'm Tien

I help life science teams turn fragile bioinformatics scripts into reliable, production-ready tools.

With roots in medicine, biotech, and systems engineering, I build infrastructure for:

  • Genomics & proteomics workflows
  • CLI and automation tools (Go, Python, Shell, Nextflow)
  • Debugging edge cases no one else wants to touch

πŸ’Ό Currently open to freelance, remote, or full-time roles in bioinformatics tooling and infrastructure.


πŸ”¬ Who I Work With

  • Early-stage biotechs moving fast but avoiding tech debt
  • Research groups turning one-off scripts into robust workflows
  • Precision medicine & healthtech teams scaling up pipelines
  • Open-source bioinformatics communities

βš™οΈ Featured Projects

  • Gommitizen: Go-based CLI for semantic commits & changelog automation
  • gentr: File watcher to auto-run commands (Γ  la entr) β€” written in Go
  • dotfiles: Terminal-first setup (Fish + Neovim + Tmux)

πŸ’» Tech Stack

Languages: Python, Go, Rust, TypeScript, SQL
Bioinformatics: Kraken2, QIIME2, FragPipe, GATK, Minimap2
Workflow Tools: Nextflow, Bash, Conda, Make, GitHub Actions
Infra: Docker, Podman, SLURM, BigQuery, AWS Batch, PostgreSQL


🌐 Connect

LinkedIn β€’ GitHub β€’ Email β€’ Buy Me a Coffee

Popular repositories Loading

  1. lrseq lrseq Public

    Nextflow 2 1

  2. pixi-container pixi-container Public

    Dockerfile 1

  3. gommitizen gommitizen Public

    Go 1

  4. misc misc Public

    Python

  5. rusticize rusticize Public

    Rust

  6. tiendu.github.io tiendu.github.io Public

    JavaScript