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Better timeslices #233

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Better timeslices #233

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6 changes: 4 additions & 2 deletions tsdate/prior.py
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Original file line number Diff line number Diff line change
Expand Up @@ -890,8 +890,10 @@ def create_timepoints(base_priors, n_points=21):
# missing samples, otherwise we only have one set of priors anyway
prior_params = base_priors.prior_with_max_total_tips()
# Percentages - current day samples should be at time 0, so we omit this
# We can't include the top end point, as this leads to NaNs
percentiles = np.linspace(0, 1, n_points + 1)[1:-1]
# We can't include 1 at the top end as it will be at infinite time
# so we take the upper time point to be a fraction lower than 1 (as if we divided
# the last timeslice into n_points evenly picked quantiles and removed the last one)
percentiles = np.linspace(0, 1 - 1 / (n_points**2), n_points)[1:]
# percentiles = np.append(percentiles, 0.999999)
param_cols = np.where([f not in ("mean", "var") for f in PriorParams._fields])[0]
"""
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