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Implement Kyle's code for p_de_novo #771

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Implement Kyle's code for p_de_novo #771

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KoalaQin
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Kyle's main changes are:

  1. introduces parent-specific de novo priors
  2. an additional scenario where the child has no alt allele based on its hom-ref probability, to get a probability of false het calls in the child.

@KoalaQin KoalaQin marked this pull request as draft March 18, 2025 00:24
@KoalaQin KoalaQin self-assigned this Mar 18, 2025
@KoalaQin KoalaQin changed the title Using kyle's code for p_de_novo Implement Kyle's code for p_de_novo Mar 18, 2025
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